Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas benzenivorans DSM 8628 (GCF_900100495.1)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.42' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Pseudomonas benzenivorans DSM 8628, or try another query

BLS63_RS05050 SAMN05216603_102397 WP_090440660.1: branched-chain amino acid transaminase
is similar to:
PaperBLAST

ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa
O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa

89% id,
100% cov

Psest_0450: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Pseudomonas stutzeri

88% id,
100% cov

BPHYT_RS16285: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Burkholderia phytofirmans

65% id,
100% cov

More...

BLS63_RS23260 SAMN05216603_1202 WP_090448183.1: amino acid aminotransferase
is similar to:
PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

55% id,
100% cov

BLS63_RS17730 SAMN05216603_11121 WP_090447114.1: amino acid aminotransferase
is similar to:
PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

45% id,
99% cov

BLS63_RS11795 SAMN05216603_10664 WP_090444274.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

39% id,
98% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

39% id,
94% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

37% id,
98% cov

More...

BLS63_RS18370 SAMN05216603_111150 WP_090447233.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

33% id,
91% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

30% id,
96% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

31% id,
92% cov

More...

BLS63_RS19070 SAMN05216603_112119 WP_090447369.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

29% id,
98% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

30% id,
92% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

29% id,
93% cov

More...

mapR BLS63_RS02400 SAMN05216603_101478 WP_090439593.1: GntR family transcriptional regulator MpaR
is similar to:
PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

30% id,
92% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

29% id,
87% cov

BLS63_RS15705 SAMN05216603_108241 WP_090446315.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

31% id,
88% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

31% id,
86% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

34% id,
78% cov

More...

pabC BLS63_RS08145 SAMN05216603_103498 WP_090442412.1: aminodeoxychorismate lyase
is similar to:
PaperBLAST

ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus
A6UWA0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus

29% id,
89% cov

F0QW25: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Vulcanisaeta moutnovskia

32% id,
36% cov

P54691: branched-chain-amino-acid transaminase (EC 2.6.1.42); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Synechocystis sp.

29% id,
40% cov

BLS63_RS22170 SAMN05216603_117102 WP_090447973.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

28% id,
88% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

27% id,
86% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

32% id,
71% cov

More...

dapC BLS63_RS09340 SAMN05216603_104214 WP_090443176.1: succinyldiaminopimelate transaminase
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

25% id,
79% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory