Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas benzenivorans DSM 8628 (GCF_900100495.1)

Found 31 curated entries in PaperBLAST's database that match '2.6.1.52' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas benzenivorans DSM 8628, or try another query

serC BLS63_RS12625 SAMN05216603_106231 WP_090444928.1: 3-phosphoserine/phosphohydroxythreonine transaminase is similar to:	PaperBLAST
SERC_ECOLI / P23721: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Escherichia coli SerC / b0907: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli serC: phosphoserine aminotransferase; EC 2.6.1.52 from Escherichia coli serC / P23721: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli P23721: phosphoserine transaminase (EC 2.6.1.52) from Escherichia coli	57% id, 99% cov
SERC_NIACI / Q59196: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Niallia circulans Q59196: phosphoserine transaminase (EC 2.6.1.52) from Niallia circulans	53% id, 100% cov
SERC_DROME / Q9VAN0: Probable phosphoserine aminotransferase; PSAT; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52 from Drosophila melanogaster	52% id, 99% cov
Q2F5M8: phosphoserine transaminase (EC 2.6.1.52) from Bombyx mori	51% id, 100% cov
SERC_HUMAN / Q9Y617: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Homo sapiens PSAT1 / Q9Y617: Phosphoserine aminotransferase (EC 2.6.1.52) from Homo sapiens Q9Y617: glycine transaminase (EC 2.6.1.4); phosphoserine transaminase (EC 2.6.1.52) from Homo sapiens	50% id, 98% cov
SERC_ALKAL / Q9RME2: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Alkalihalobacillus alcalophilus Q9RME2: phosphoserine transaminase (EC 2.6.1.52) from Alkalihalobacillus alcalophilus	49% id, 100% cov
SERC_SPIOL / P52877: Phosphoserine aminotransferase, chloroplastic; PSAT; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52 from Spinacia oleracea	54% id, 85% cov
SERB2_ARATH / Q9SHP0: Phosphoserine aminotransferase 2, chloroplastic; AtPSAT2; EC 2.6.1.52 from Arabidopsis thaliana Q9SHP0: phosphoserine transaminase (EC 2.6.1.52) from Arabidopsis thaliana	53% id, 86% cov
PSAT1 / A2FXW5: phosphoserine transaminase (EC 2.6.1.52) from Trichomonas vaginalis	44% id, 99% cov
SERB1_ARATH / Q96255: Phosphoserine aminotransferase 1, chloroplastic; AtPSAT1; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52 from Arabidopsis thaliana PSAT / Q96255: phosphoserine aminotransferase (EC 2.6.1.52) from Arabidopsis thaliana Q96255: phosphoserine transaminase (EC 2.6.1.52) from Arabidopsis thaliana	51% id, 84% cov
V9NC98: phosphoserine transaminase (EC 2.6.1.52) from Acanthamoeba castellanii	44% id, 97% cov
SERC_YEAST / P33330: Phosphoserine aminotransferase; PSAT; Phosphohydroxythreonine aminotransferase; Serine requiring protein 1; EC 2.6.1.52 from Saccharomyces cerevisiae	38% id, 98% cov
More...

serC BLS63_RS26700 SAMN05216603_110110 WP_143023905.1: 3-phosphoserine/phosphohydroxythreonine transaminase is similar to:	PaperBLAST
SERC_ECOLI / P23721: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Escherichia coli SerC / b0907: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli serC: phosphoserine aminotransferase; EC 2.6.1.52 from Escherichia coli serC / P23721: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli P23721: phosphoserine transaminase (EC 2.6.1.52) from Escherichia coli	44% id, 99% cov
SERC_NIACI / Q59196: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Niallia circulans Q59196: phosphoserine transaminase (EC 2.6.1.52) from Niallia circulans	42% id, 99% cov
SERC_HUMAN / Q9Y617: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Homo sapiens PSAT1 / Q9Y617: Phosphoserine aminotransferase (EC 2.6.1.52) from Homo sapiens Q9Y617: glycine transaminase (EC 2.6.1.4); phosphoserine transaminase (EC 2.6.1.52) from Homo sapiens	41% id, 97% cov
SERC_ALKAL / Q9RME2: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Alkalihalobacillus alcalophilus Q9RME2: phosphoserine transaminase (EC 2.6.1.52) from Alkalihalobacillus alcalophilus	40% id, 98% cov
SERC_DROME / Q9VAN0: Probable phosphoserine aminotransferase; PSAT; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52 from Drosophila melanogaster	39% id, 99% cov
Q2F5M8: phosphoserine transaminase (EC 2.6.1.52) from Bombyx mori	39% id, 99% cov
V9NC98: phosphoserine transaminase (EC 2.6.1.52) from Acanthamoeba castellanii	38% id, 98% cov
SERB2_ARATH / Q9SHP0: Phosphoserine aminotransferase 2, chloroplastic; AtPSAT2; EC 2.6.1.52 from Arabidopsis thaliana Q9SHP0: phosphoserine transaminase (EC 2.6.1.52) from Arabidopsis thaliana	41% id, 86% cov
PSAT1 / A2FXW5: phosphoserine transaminase (EC 2.6.1.52) from Trichomonas vaginalis	36% id, 98% cov
SERC_SPIOL / P52877: Phosphoserine aminotransferase, chloroplastic; PSAT; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52 from Spinacia oleracea	41% id, 84% cov
SERB1_ARATH / Q96255: Phosphoserine aminotransferase 1, chloroplastic; AtPSAT1; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52 from Arabidopsis thaliana PSAT / Q96255: phosphoserine aminotransferase (EC 2.6.1.52) from Arabidopsis thaliana Q96255: phosphoserine transaminase (EC 2.6.1.52) from Arabidopsis thaliana	41% id, 84% cov
SERC_YEAST / P33330: Phosphoserine aminotransferase; PSAT; Phosphohydroxythreonine aminotransferase; Serine requiring protein 1; EC 2.6.1.52 from Saccharomyces cerevisiae	32% id, 98% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory