Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas benzenivorans DSM 8628 (GCF_900100495.1)

Found 15 curated entries in PaperBLAST's database that match '2.7.2.2' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas benzenivorans DSM 8628, or try another query

arcC BLS63_RS10655 SAMN05216603_105155 WP_090443604.1: carbamate kinase
is similar to:
PaperBLAST

C6A5J0: carbamate kinase (EC 2.7.2.2) from Thermococcus sibiricus

47% id,
99% cov

F0LK57: carbamate kinase (EC 2.7.2.2) from Thermococcus barophilus

47% id,
98% cov

O96432: carbamate kinase (EC 2.7.2.2) from Trichomonas vaginalis

45% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory