Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas benzenivorans DSM 8628 (GCF_900100495.1)

Found 25 curated entries in PaperBLAST's database that match '2.7.2.8' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas benzenivorans DSM 8628, or try another query

argB BLS63_RS18950 SAMN05216603_11295 WP_090447349.1: acetylglutamate kinase
is similar to:
PaperBLAST

ARGB_PSEAE / Q9HTN2: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Pseudomonas aeruginosa
Q9HTN2: acetylglutamate kinase (EC 2.7.2.8) from Pseudomonas aeruginosa

94% id,
100% cov

ARGB_THEMA / Q9X2A4: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Thermotoga maritima
Q9X2A4: acetylglutamate kinase (EC 2.7.2.8) from Thermotoga maritima

51% id,
98% cov

Q6V1L5: acetylglutamate kinase (EC 2.7.2.8) from Synechococcus elongatus

49% id,
96% cov

More...

argA BLS63_RS11100 SAMN05216603_105246 WP_090443859.1: amino-acid N-acetyltransferase
is similar to:
PaperBLAST

Q8P8J6: acetylglutamate kinase (EC 2.7.2.8) from Xanthomonas campestris

25% id,
78% cov

A0A0H2X8L7: acetylglutamate kinase (EC 2.7.2.8) from Xanthomonas campestris

25% id,
74% cov

N515DRAFT_3768: N-acetylglutamate synthase; N-acetylglutamate kinase (EC 2.3.1.1; EC 2.7.2.8) from Dyella japonica

27% id,
63% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory