Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas benzenivorans DSM 8628 (GCF_900100495.1)

Found 241 curated entries in PaperBLAST's database that match '3.2.1.26' as complete word(s).

These curated entries have 195 distinct sequences.

Running ublast with E ≤ 0.01

Found 0 relevant proteins in Pseudomonas benzenivorans DSM 8628, or try another query

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

55037-56683 (frame -2) on NZ_FNCT01000011.1 Pseudomonas benzenivorans strain DSM 8628, whole genome shotgun sequence
is similar to:
PaperBLAST

ams / G4T024: sucrose β-fructofuranosidase (EC 3.2.1.26; EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum

29% id,
30% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory