Searching in Pseudomonas benzenivorans DSM 8628 (GCF_900100495.1)
Found 22 curated entries in PaperBLAST's database that match '4.3.1.18' as complete word(s).
These curated entries have 18 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Pseudomonas benzenivorans DSM 8628, or try another query
| dsdA BLS63_RS19965 SAMN05216603_1147 WP_090447547.1: D-serine ammonia-lyase is similar to: | PaperBLAST |
Q9HYN9: D-Serine ammonia-lyase (EC 4.3.1.18) from Pseudomonas aeruginosa | 74% id, 100% cov |
PfGW456L13_3648: D-serine ammonia-lyase (EC 4.3.1.18) from Pseudomonas fluorescens | 74% id, 99% cov |
AO353_25210: D-serine ammonia-lyase (EC 4.3.1.18) from Pseudomonas fluorescens | 68% id, 99% cov |
| ilvA BLS63_RS16565 SAMN05216603_109172 WP_090446659.1: threonine ammonia-lyase, biosynthetic is similar to: | PaperBLAST |
SRR_ARATH / Q2PGG3: Serine racemase; AtSR; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 4.3.1.17; EC 4.3.1.18; EC 5.1.1.18 from Arabidopsis thaliana | 37% id, 96% cov |
SRR_SCHPO / O59791: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 4.3.1.17; EC 4.3.1.18; EC 5.1.1.18 from Schizosaccharomyces pombe | 35% id, 94% cov |
SRR_RAT / Q76EQ0: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Rattus norvegicus | 35% id, 94% cov |
| BLS63_RS23910 SAMN05216603_12147 WP_090448305.1: 1-aminocyclopropane-1-carboxylate deaminase is similar to: | PaperBLAST |
O57809: L-serine ammonia-lyase (EC 4.3.1.17); D-Serine ammonia-lyase (EC 4.3.1.18) from Pyrococcus horikoshii | 33% id, 96% cov |
| cysM BLS63_RS06045 SAMN05216603_10376 WP_090441296.1: cysteine synthase CysM is similar to: | PaperBLAST |
SRR_ORYSJ / Q7XSN8: Serine racemase; D-serine dehydratase; D-serine ammonia-lyase; L-serine dehydratase; L-serine ammonia-lyase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Oryza sativa | 23% id, 82% cov |
| BLS63_RS11530 SAMN05216603_10610 WP_218131163.1: cystathionine beta-synthase is similar to: | PaperBLAST |
O57809: L-serine ammonia-lyase (EC 4.3.1.17); D-Serine ammonia-lyase (EC 4.3.1.18) from Pyrococcus horikoshii | 24% id, 58% cov |
| BLS63_RS05215 SAMN05216603_102430 WP_090440756.1: glycosyltransferase family 2 protein is similar to: | PaperBLAST |
DSD1_CHICK / A0A8V1ABE9: D-serine dehydratase; EC 4.3.1.18 from Gallus gallus | 38% id, 11% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory