Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas benzenivorans DSM 8628 (GCF_900100495.1)

Found 25 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas benzenivorans DSM 8628, or try another query

BLS63_RS17885 SAMN05216603_11151 WP_090447140.1: alpha glucosidase
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

35% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory