Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiohalomonas denitrificans HLD2 (GCF_900102855.1)

Found 10 curated entries in PaperBLAST's database that match '2.3.1.117' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thiohalomonas denitrificans HLD2, or try another query

dapD BLP65_RS05925 SAMN03097708_01194 WP_092993923.1: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
is similar to:
PaperBLAST

DAPD_ECOLI / P0A9D8: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Succinyl-CoA: tetrahydrodipicolinate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Escherichia coli
Ssa / b0166: tetrahydrodipicolinate succinylase (EC 2.3.1.117) from Escherichia coli
dapD / P0A9D8: tetrahydrodipicolinate succinylase (EC 2.3.1.117) from Escherichia coli

75% id,
100% cov

Q8X8Y7: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) from Escherichia coli

74% id,
100% cov

DAPD_UNKP / P56220: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Unknown prokaryotic

74% id,
100% cov

More...

BLP65_RS17320 WP_281180244.1: acyltransferase
is similar to:
PaperBLAST

DAPD_ECOLI / P0A9D8: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Succinyl-CoA: tetrahydrodipicolinate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Escherichia coli
Ssa / b0166: tetrahydrodipicolinate succinylase (EC 2.3.1.117) from Escherichia coli
dapD / P0A9D8: tetrahydrodipicolinate succinylase (EC 2.3.1.117) from Escherichia coli

23% id,
46% cov

Q8X8Y7: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) from Escherichia coli

23% id,
46% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory