Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiohalomonas denitrificans HLD2 (GCF_900102855.1)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Thiohalomonas denitrificans HLD2, or try another query

asnB BLP65_RS06145 SAMN03097708_01238 WP_092994041.1: asparagine synthase (glutamine-hydrolyzing)
is similar to:
PaperBLAST

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

31% id,
97% cov

Q9SP19: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus

32% id,
92% cov

ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis

28% id,
98% cov

More...

BLP65_RS06795 SAMN03097708_01374 WP_092994459.1: N-acetylglutaminylglutamine amidotransferase
is similar to:
PaperBLAST

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

31% id,
99% cov

F2DDF6: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare

26% id,
93% cov

ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis

37% id,
61% cov

More...

BLP65_RS05110 SAMN03097708_01030 WP_092993470.1: asparagine synthase-related protein
is similar to:
PaperBLAST

ASNS_HUMAN / P08243: Asparagine synthetase [glutamine-hydrolyzing]; Cell cycle control protein TS11; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Homo sapiens
P08243: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Homo sapiens

25% id,
54% cov

ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis

26% id,
44% cov

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

23% id,
48% cov

More...

glmS BLP65_RS12985 SAMN03097708_02630 WP_092998029.1: glutamine--fructose-6-phosphate transaminase (isomerizing)
is similar to:
PaperBLAST

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

28% id,
24% cov

Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus

31% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory