Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiohalomonas denitrificans HLD2 (GCF_900102855.1)

Found 28 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Thiohalomonas denitrificans HLD2, or try another query

BLP65_RS08235 SAMN03097708_01664 WP_092995230.1: PLP-dependent aspartate aminotransferase family protein
is similar to:		 PaperBLAST

metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori

 43% id,
99% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 40% id,
99% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 41% id,
97% cov

More...

BLP65_RS12545 SAMN03097708_02539 WP_092997718.1: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 43% id,
98% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 44% id,
94% cov

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 41% id,
98% cov

More...

cysM BLP65_RS08735 SAMN03097708_01765 WP_092995569.1: cysteine synthase CysM
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 43% id,
93% cov

BLP65_RS07250 SAMN03097708_01464 WP_092994707.1: bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
is similar to:		 PaperBLAST

metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori

 38% id,
99% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 37% id,
99% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 37% id,
96% cov

More...

hisC BLP65_RS00425 SAMN03097708_00092 WP_092991509.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

B3TNN8: cystathionine gamma-lyase (subunit 2/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

 29% id,
36% cov

B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

 28% id,
36% cov

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 34% id,
24% cov

More...

BLP65_RS00370 SAMN03097708_00081 WP_092991489.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

CGL_HUMAN / P32929: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Homo sapiens
P32929: cystathionine gamma-lyase (EC 4.4.1.1) from Homo sapiens

 26% id,
37% cov

8j6nA / P18757: Crystal structure of cystathionine gamma-lyase in complex with compound 1

 31% id,
24% cov

CGL_RAT / P18757: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; Probasin-related antigen; PRB-RA; EC 4.4.1.1; EC 4.4.1.2 from Rattus norvegicus

 31% id,
23% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory