Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiohalomonas denitrificans HLD2 (GCF_900102855.1)

Found 1 curated entries in PaperBLAST's database that match 'cystathionine-gamma-lyase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Thiohalomonas denitrificans HLD2, or try another query

BLP65_RS08235 SAMN03097708_01664 WP_092995230.1: PLP-dependent aspartate aminotransferase family protein
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

37% id,
89% cov

BLP65_RS12545 SAMN03097708_02539 WP_092997718.1: O-succinylhomoserine sulfhydrylase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

36% id,
89% cov

BLP65_RS07250 SAMN03097708_01464 WP_092994707.1: bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

37% id,
48% cov

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

34% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory