Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiohalomonas denitrificans HLD2 (GCF_900102855.1)

Found 4 curated entries in PaperBLAST's database that match 'glutamyl-tRNA(Gln) amidotransferase subunit B' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Thiohalomonas denitrificans HLD2, or try another query

gatB BLP65_RS07855 SAMN03097708_01585 WP_317623053.1: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
is similar to:
PaperBLAST

GATB_ARATH / Q9FV81: Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Glu-AdT subunit B; EC 6.3.5.- from Arabidopsis thaliana

48% id,
87% cov

GATB_HUMAN / O75879: Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; Cytochrome c oxidase assembly factor PET112 homolog; EC 6.3.5.- from Homo sapiens

37% id,
89% cov

GATB_YEAST / P33893: Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; Cytochrome c oxidase assembly factor PET112; EC 6.3.5.- from Saccharomyces cerevisiae

33% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory