Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Halopseudomonas litoralis 2SM5 (GCF_900105005.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.2.1' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Halopseudomonas litoralis 2SM5, or try another query

purT BLU11_RS01770 SAMN05216198_0363 WP_090271769.1: formate-dependent phosphoribosylglycinamide formyltransferase is similar to:	PaperBLAST
PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli	67% id, 100% cov

BLU11_RS12900 SAMN05216198_2635 WP_090273977.1: acetate kinase is similar to:	PaperBLAST
E3W769: acetate kinase (EC 2.7.2.1) from Shewanella sp.	48% id, 99% cov
ACKA_SALTY / P63411: Acetate kinase AckA; Acetokinase; EC 2.7.2.1 from Salmonella typhimurium P63411: acetate kinase (EC 2.7.2.1) from Salmonella enterica	45% id, 99% cov
YhaA / b3115: propionate kinase (EC 2.7.2.7; EC 2.7.2.1; EC 2.7.2.15; EC 2.7.2.14) from Escherichia coli	46% id, 96% cov
G4T0C7: acetate kinase (EC 2.7.2.1) from Methylotuvimicrobium alcaliphilum	46% id, 97% cov
ACKA_ECOLI / P0A6A3: Acetate kinase; Acetokinase; EC 2.7.2.1 from Escherichia coli AckA / b2296: acetate kinase (EC 2.7.2.15; EC 2.7.2.1; EC 2.7.2.7; EC 2.7.2.14) from Escherichia coli ackA / RF\|NP_416799: acetate kinase; EC 2.7.2.1 from Escherichia coli P0A6A5: acetate kinase (EC 2.7.2.1) from Escherichia coli P0A6A3: acetate kinase (EC 2.7.2.1) from Escherichia coli	44% id, 99% cov
ACKA_CORGL / P77845: Acetate kinase; Acetokinase; EC 2.7.2.1 from Corynebacterium glutamicum	44% id, 98% cov
ACKA_THEMA / Q9WYB1: Acetate kinase; Acetokinase; EC 2.7.2.1 from Thermotoga maritima ackA / PDB\|2IIR_A: acetate kinase; EC 2.7.2.1 from Thermotoga maritima Q9WYB1: acetate kinase (EC 2.7.2.1) from Thermotoga maritima	43% id, 99% cov
P9WQH1: acetate kinase (EC 2.7.2.1) from Mycobacterium tuberculosis	43% id, 98% cov
ACKA_BACSU / P37877: Acetate kinase; Acetokinase; EC 2.7.2.1 from Bacillus subtilis	42% id, 99% cov
ACKA_METTE / P38502: Acetate kinase; Acetokinase; EC 2.7.2.1 from Methanosarcina thermophila P38502: acetate kinase (EC 2.7.2.1) from Methanosarcina thermophila	42% id, 97% cov
B2RK02: acetate kinase (EC 2.7.2.1) from Porphyromonas gingivalis	41% id, 99% cov
A2RNG5: acetate kinase (EC 2.7.2.1) from Lactococcus lactis	40% id, 99% cov
P0CW04: acetate kinase (EC 2.7.2.1) from Methanosarcina mazei	39% id, 100% cov
P0CW05: acetate kinase (EC 2.7.2.1) from Methanosarcina mazei	39% id, 100% cov
A2RNG4: acetate kinase (EC 2.7.2.1) from Lactococcus lactis	39% id, 98% cov
Q9F1X7: acetate kinase (EC 2.7.2.1) from Fructilactobacillus sanfranciscensis	37% id, 98% cov
P75245: acetate kinase (EC 2.7.2.1) from Mycoplasma pneumoniae	35% id, 100% cov
J9W3A6: acetate kinase (EC 2.7.2.1) from Cryptococcus neoformans	32% id, 98% cov
C4M1C3: acetate kinase (EC 2.7.2.1); acetate kinase (diphosphate) (EC 2.7.2.12) from Entamoeba histolytica	30% id, 97% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory