Curated BLAST for Genomes

 

Curated BLAST

Searching in Mucilaginibacter mallensis MP1X4 (GCF_900105165.1)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.43' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Mucilaginibacter mallensis MP1X4, or try another query

BLU33_RS17605 SAMN05216490_3591 WP_091375988.1: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens

34% id,
91% cov

PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae

40% id,
75% cov

AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens

40% id,
74% cov

More...

BLU33_RS10820 SAMN05216490_2193 WP_172829242.1: D-2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans

35% id,
87% cov

AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens

35% id,
80% cov

kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens

33% id,
83% cov

More...

BLU33_RS05855 SAMN05216490_1186 WP_091370263.1: D-2-hydroxyacid dehydrogenase family protein
is similar to:
PaperBLAST

kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens

38% id,
73% cov

BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans

37% id,
74% cov

PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae

37% id,
73% cov

More...

BLU33_RS22945 SAMN05216490_4665 WP_091378962.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens

30% id,
91% cov

AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens

30% id,
91% cov

BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans

28% id,
81% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory