Curated BLAST for Genomes

 

Curated BLAST

Searching in Mucilaginibacter mallensis MP1X4 (GCF_900105165.1)

Found 6 curated entries in PaperBLAST's database that match '1.1.1.60' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Mucilaginibacter mallensis MP1X4, or try another query

BLU33_RS24355 SAMN05216490_4955 WP_091379705.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

33% id,
95% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

33% id,
95% cov

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

30% id,
96% cov

BLU33_RS13615 SAMN05216490_2766 WP_091373748.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

29% id,
94% cov

A0A0D1DYW4: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Ustilago maydis

31% id,
86% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

28% id,
94% cov

More...

BLU33_RS10565 SAMN05216490_2140 WP_091372148.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

A0A0D1DYW4: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Ustilago maydis

26% id,
83% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory