Curated BLAST for Genomes

 

Curated BLAST

Searching in Mucilaginibacter mallensis MP1X4 (GCF_900105165.1)

Found 34 curated entries in PaperBLAST's database that match '5.3.1.8' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Mucilaginibacter mallensis MP1X4, or try another query

BLU33_RS05090 SAMN05216490_1030 WP_091369970.1: type I phosphomannose isomerase catalytic subunit
is similar to:
PaperBLAST

MANA1_BACSU / O31646: Mannose-6-phosphate isomerase ManA; Phosphohexomutase; Phosphomannose isomerase; PMI; EC 5.3.1.8 from Bacillus subtilis

37% id,
98% cov

Q9AGZ4: mannose-6-phosphate isomerase (EC 5.3.1.8) from Bacillus subtilis

38% id,
93% cov

MANA2_BACSU / O05511: Probable mannose-6-phosphate isomerase GmuF; Glucomannan utilization protein F; Phosphohexomutase; Phosphomannose isomerase; PMI; EC 5.3.1.8 from Bacillus subtilis

37% id,
93% cov

More...

BLU33_RS07230 SAMN05216490_1463 WP_091370770.1: type I phosphomannose isomerase catalytic subunit
is similar to:
PaperBLAST

MANA1_BACSU / O31646: Mannose-6-phosphate isomerase ManA; Phosphohexomutase; Phosphomannose isomerase; PMI; EC 5.3.1.8 from Bacillus subtilis

35% id,
95% cov

A4ITT1: mannose-6-phosphate isomerase (EC 5.3.1.8) from Geobacillus thermodenitrificans

33% id,
93% cov

MANA2_BACSU / O05511: Probable mannose-6-phosphate isomerase GmuF; Glucomannan utilization protein F; Phosphohexomutase; Phosphomannose isomerase; PMI; EC 5.3.1.8 from Bacillus subtilis

31% id,
95% cov

More...

glmM BLU33_RS08520 SAMN05216490_1725 WP_091371285.1: phosphoglucosamine mutase
is similar to:
PaperBLAST

ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii

32% id,
97% cov

BLU33_RS14640 SAMN05216490_2981 WP_091374318.1: mannose-1-phosphate guanylyltransferase
is similar to:
PaperBLAST

PH0925 / O58649: GDP-D-mannose pyrophosphorylase (EC 2.7.7.13; EC 5.3.1.8) from Pyrococcus horikoshii

34% id,
74% cov

ALGA_PSEAE / P07874: Alginate biosynthesis protein AlgA; EC 5.3.1.8; EC 2.7.7.13 from Pseudomonas aeruginosa
algA / P07874: phosphomannose isomerase (EC 5.3.1.8; EC 2.7.7.13) from Pseudomonas aeruginosa

35% id,
71% cov

algA / GI|31296823: alginate biosynthesis protein AlgA; EC 2.7.7.13; EC 5.3.1.8 from Pseudomonas fluorescens

34% id,
72% cov

BLU33_RS13775 SAMN05216490_2799 WP_091373824.1: phospho-sugar mutase
is similar to:
PaperBLAST

ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii

25% id,
91% cov

BLU33_RS04925 SAMN05216490_0997 WP_232009397.1: class I mannose-6-phosphate isomerase
is similar to:
PaperBLAST

A4ITT1: mannose-6-phosphate isomerase (EC 5.3.1.8) from Geobacillus thermodenitrificans

22% id,
91% cov

Q9AGZ4: mannose-6-phosphate isomerase (EC 5.3.1.8) from Bacillus subtilis

26% id,
71% cov

MANA2_BACSU / O05511: Probable mannose-6-phosphate isomerase GmuF; Glucomannan utilization protein F; Phosphohexomutase; Phosphomannose isomerase; PMI; EC 5.3.1.8 from Bacillus subtilis

24% id,
75% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory