Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfuromusa kysingii DSM 7343 (GCF_900107645.1)

Found 24 curated entries in PaperBLAST's database that match '1.2.1.11' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfuromusa kysingii DSM 7343, or try another query

BLU87_RS01560 SAMN05660420_00314 WP_092344170.1: aspartate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

asd / Q04797: aspartate semialdehyde dehydrogenase subunit (EC 1.2.1.11) from Bacillus subtilis

49% id,
99% cov

DHAS2_VIBCH / P23247: Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 from Vibrio cholerae

47% id,
99% cov

AT1G14810 / Q8VYI4: aspartate semialdehyde dehydrogenase (EC 1.2.1.11) from Arabidopsis thaliana

45% id,
92% cov

More...

BLU87_RS01575 SAMN05660420_00317 WP_092344173.1: aspartate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

asd / Q04797: aspartate semialdehyde dehydrogenase subunit (EC 1.2.1.11) from Bacillus subtilis

48% id,
97% cov

DHAS2_VIBCH / P23247: Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 from Vibrio cholerae

47% id,
99% cov

AT1G14810 / Q8VYI4: aspartate semialdehyde dehydrogenase (EC 1.2.1.11) from Arabidopsis thaliana

50% id,
91% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory