Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfuromusa kysingii DSM 7343 (GCF_900107645.1)

Found 105 curated entries in PaperBLAST's database that match '1.2.1.3' as complete word(s).

These curated entries have 88 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Desulfuromusa kysingii DSM 7343, or try another query

BLU87_RS07020 SAMN05660420_01407 WP_092346115.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Psest_2276: Aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas stutzeri

51% id,
97% cov

ALDH_PARDP / A1B4L2: Aldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.3 from Paracoccus denitrificans
adh / A1B4L2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Paracoccus denitrificans

50% id,
97% cov

Q4F895: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rhodococcus erythropolis

49% id,
97% cov

More...

BLU87_RS03510 SAMN05660420_00700 WP_092344789.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

ALDH_PAENI / Q8GAK7: Aldehyde dehydrogenase; NAD/NADP-dependent aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.4 from Paenarthrobacter nicotinovorans

47% id,
100% cov

A6T8Z5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Klebsiella pneumoniae

48% id,
97% cov

AL9A1_HUMAN / P49189: 4-trimethylaminobutyraldehyde dehydrogenase; TMABA-DH; TMABALDH; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; Formaldehyde dehydrogenase; Gamma-aminobutyraldehyde dehydrogenase; R-aminobutyraldehyde dehydrogenase; EC 1.2.1.47; EC 1.2.1.3; EC 1.2.1.46; EC 1.2.1.19 from Homo sapiens
ALDH9A1 / P49189: aldehyde dehydrogenase, E3 isozyme (EC 1.2.1.19; EC 1.2.1.3; EC 1.2.1.47) from Homo sapiens

33% id,
93% cov

More...

BLU87_RS05845 SAMN05660420_01172 WP_092345688.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

38% id,
94% cov

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

36% id,
96% cov

AL1A1_RABIT / Q8MI17: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Oryctolagus cuniculus

36% id,
96% cov

More...

BLU87_RS08580 SAMN05660420_01722 WP_092346807.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

A9KN57: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Lachnoclostridium phytofermentans

32% id,
91% cov

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

42% id,
51% cov

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

39% id,
52% cov

More...

tdh BLU87_RS10015 SAMN05660420_02010 WP_092347620.1: L-threonine 3-dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

27% id,
94% cov

BLU87_RS05345 SAMN05660420_01070 WP_092345435.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

BWI76_RS21985: acetaldehyde dehydrogenase (EC 1.2.1.3) from Klebsiella michiganensis

30% id,
67% cov

ALD5 / P40047: aldehyde dehydrogenase, mitochondrial (EC 1.2.1.4; EC 1.2.1.3) from Saccharomyces cerevisiae

32% id,
60% cov

LUC3_FUSSX / A0A6J4B898: Aldehyde dehydrogenase LUC3; Lucilactaene biosynthesis cluster protein 3; EC 1.2.1.3 from Fusarium sp.

28% id,
67% cov

More...

BLU87_RS15950 SAMN05660420_03187 WP_139167598.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

28% id,
65% cov

ALD5 / P40047: aldehyde dehydrogenase, mitochondrial (EC 1.2.1.4; EC 1.2.1.3) from Saccharomyces cerevisiae

31% id,
58% cov

ALDY_BACSU / P94358: Putative aldehyde dehydrogenase AldY; EC 1.2.1.3 from Bacillus subtilis

28% id,
63% cov

More...

BLU87_RS05835 SAMN05660420_01170 WP_092345684.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

34% id,
31% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

34% id,
31% cov

BLU87_RS10700 SAMN05660420_02143 WP_092348027.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

22% id,
44% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

22% id,
44% cov

BLU87_RS13555 SAMN05660420_02714 WP_092349705.1: phosphonoacetaldehyde reductase
is similar to:
PaperBLAST

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

28% id,
33% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

28% id,
33% cov

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

23% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

268246-269700 (frame -2) on NZ_FNQN01000004.1 Desulfuromusa kysingii strain DSM 7343, whole genome shotgun sequence
is similar to:
PaperBLAST

A9KN57: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Lachnoclostridium phytofermentans
Also see hits to annotated proteins above

32% id,
92% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory