Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfuromusa kysingii DSM 7343 (GCF_900107645.1)

Found 33 curated entries in PaperBLAST's database that match '1.5.1.2' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfuromusa kysingii DSM 7343, or try another query

proC BLU87_RS02750 SAMN05660420_00551 WP_092344454.1: pyrroline-5-carboxylate reductase
is similar to:
PaperBLAST

PROC1 / F2E7Q2: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Hordeum vulgare

49% id,
96% cov

G7KRM5: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Medicago truncatula

48% id,
97% cov

P5CR_METAC / Q9HH99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Methanosarcina acetivorans

47% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

629817-630764 (frame -2) on NZ_FNQN01000001.1 Desulfuromusa kysingii strain DSM 7343, whole genome shotgun sequence
is similar to:
PaperBLAST

CA265_RS18505: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Pedobacter sp.

24% id,
78% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory