Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfuromusa kysingii DSM 7343 (GCF_900107645.1)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.42' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Desulfuromusa kysingii DSM 7343, or try another query

BLU87_RS13210 SAMN05660420_02645 WP_092349638.1: branched-chain amino acid aminotransferase
is similar to:
PaperBLAST

ILVE1_BACSU / O31461: Branched-chain-amino-acid transaminase 1; BCAT 1; EC 2.6.1.42 from Bacillus subtilis
ilvE / O31461: branched-chain amino acid aminotransferase (EC 2.6.1.6; EC 2.6.1.42) from Bacillus subtilis

52% id,
96% cov

A0A2Z4MEX9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Brevibacillus brevis

50% id,
98% cov

ILVE2_BACSU / P39576: Branched-chain-amino-acid aminotransferase 2; BCAT 2; Vegetative protein 85; VEG85; EC 2.6.1.42 from Bacillus subtilis
ilvK / P39576: branched-chain amino acid aminotransferase (EC 2.6.1.42; EC 2.6.1.6) from Bacillus subtilis

50% id,
96% cov

More...

BLU87_RS15100 SAMN05660420_03020 WP_092350344.1: amino acid aminotransferase
is similar to:
PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

43% id,
100% cov

BLU87_RS10080 SAMN05660420_02023 WP_092347659.1: aminotransferase class IV
is similar to:
PaperBLAST

A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis

37% id,
96% cov

GB|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus

37% id,
96% cov

ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus
A6UWA0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus

35% id,
96% cov

More...

BLU87_RS05775 SAMN05660420_01158 WP_092345660.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

29% id,
95% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

26% id,
99% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

26% id,
98% cov

More...

BLU87_RS08685 SAMN05660420_01743 WP_217637464.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

26% id,
89% cov

BLU87_RS05900 SAMN05660420_01183 WP_092345708.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

27% id,
82% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

24% id,
81% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory