Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfuromusa kysingii DSM 7343 (GCF_900107645.1)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfuromusa kysingii DSM 7343, or try another query

BLU87_RS07095 SAMN05660420_01422 WP_175498290.1: amidohydrolase family protein
is similar to:
PaperBLAST

RR42_RS16905: Imidazolonepropionase (EC 3.5.2.7) from Cupriavidus basilensis

36% id,
21% cov

BLU87_RS11160 SAMN05660420_02237 WP_092348307.1: dihydroorotase
is similar to:
PaperBLAST

Ga0059261_3964: Imidazolonepropionase (EC 3.5.2.7) from Sphingomonas koreensis

34% id,
20% cov

HUTI_BACSU / P42084: Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis
P42084: imidazolonepropionase (EC 3.5.2.7) from Bacillus subtilis

42% id,
14% cov

phnM BLU87_RS08490 SAMN05660420_01704 WP_092346759.1: phosphonate metabolism protein PhnM
is similar to:
PaperBLAST

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

36% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory