Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfuromusa kysingii DSM 7343 (GCF_900107645.1)

Found 90 curated entries in PaperBLAST's database that match '5.3.1.1' as complete word(s).

These curated entries have 57 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfuromusa kysingii DSM 7343, or try another query

tpiA BLU87_RS10615 SAMN05660420_02126 WP_281242541.1: triose-phosphate isomerase
is similar to:		 PaperBLAST

TPIS_CLOPE / Q8XKU1: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Clostridium perfringens

 50% id,
100% cov

tpiA / O32757: triosephosphate isomerase subunit (EC 5.3.1.1) from Lactobacillus delbrueckii

 49% id,
99% cov

TPIS_STAAR / Q6GIL6: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Staphylococcus aureus
Q6GIL6: triose-phosphate isomerase (EC 5.3.1.1) from Staphylococcus aureus

 49% id,
99% cov

More...

BLU87_RS10620 SAMN05660420_02127 WP_092347989.1: phosphoglycerate kinase
is similar to:		 PaperBLAST

PGKT_THEMA / P36204: Bifunctional PGK/TIM; EC 2.7.2.3; EC 5.3.1.1 from Thermotoga maritima
pgk / P36204: Pgk (EC 2.7.2.3; EC 5.3.1.1) from Thermotoga maritima
P36204: triose-phosphate isomerase (EC 5.3.1.1) from Thermotoga maritima

 57% id,
61% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory