Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfuromusa kysingii DSM 7343 (GCF_900107645.1)

Found 44 curated entries in PaperBLAST's database that match '6.2.1.1' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Desulfuromusa kysingii DSM 7343, or try another query

BLU87_RS12135 SAMN05660420_02431 WP_092348856.1: AMP-binding protein
is similar to:
PaperBLAST

ACSA_SALTY / Q8ZKF6: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Salmonella typhimurium

34% id,
93% cov

AO353_03060: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

35% id,
90% cov

AO356_18695: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

35% id,
90% cov

More...

BLU87_RS12405 SAMN05660420_02485 WP_092348994.1: fatty acid--CoA ligase
is similar to:
PaperBLAST

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

31% id,
96% cov

CCL3_HUMLU / M4IS88: Acetate--CoA ligase CCL3; HlCCL3; 2-methylbutanoate--CoA ligase CCL4; 2-methylpropanoate--CoA ligase CCL4; Butanoate--CoA ligase CCL3; Hexanoate--CoA ligase CCL3; Isovalerate--CoA ligase CCL3; Pentanoate--CoA ligase CCL3; Propionate--CoA ligase CCL3; EC 6.2.1.1; EC 6.2.1.-; EC 6.2.1.17 from Humulus lupulus

32% id,
93% cov

CCL4 / M4IQQ5: isobutanoate/2-methylbutanoate--CoA ligase (EC 6.2.1.1) from Humulus lupulus

30% id,
97% cov

More...

caiC BLU87_RS12315 SAMN05660420_02467 WP_217637509.1: crotonobetaine/carnitine-CoA ligase
is similar to:
PaperBLAST

HBCL1_METS5 / A4YDT1: 4-hydroxybutyrate--CoA ligase 1; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

27% id,
92% cov

ACSA_BACSU / P39062: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Bacillus subtilis

26% id,
89% cov

Q2XNL6: acetate-CoA ligase (EC 6.2.1.1) from Methanothermobacter thermautotrophicus

23% id,
85% cov

More...

BLU87_RS14075 SAMN05660420_02817 WP_092349928.1: AMP-binding protein
is similar to:
PaperBLAST

AEE7_ARATH / Q8VZF1: Acetate/butyrate--CoA ligase AAE7, peroxisomal; AMP-binding protein 7; AtAMPBP7; Acetyl-CoA synthetase; Acyl-activating enzyme 7; Butyryl-CoA synthetase; Protein ACETATE NON-UTILIZING 1; EC 6.2.1.1; EC 6.2.1.2 from Arabidopsis thaliana

25% id,
71% cov

CCL2 / M4IRL4: isovalerate--CoA ligase (EC 6.2.1.1) from Humulus lupulus

25% id,
65% cov

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

30% id,
42% cov

More...

BLU87_RS15165 SAMN05660420_03033 WP_092350366.1: fatty acid CoA ligase family protein
is similar to:
PaperBLAST

acs1 / Q2LWR8: acetate—CoA ligase (EC 6.2.1.1) from Syntrophus aciditrophicus

24% id,
72% cov

ACS2_YEAST / P52910: Acetyl-coenzyme A synthetase 2; Acetate--CoA ligase 2; Acyl-activating enzyme 2; EC 6.2.1.1 from Saccharomyces cerevisiae
ACS2 / P52910: acetyl CoA synthetase 2 (EC 6.2.1.1) from Saccharomyces cerevisiae
P52910: acetate-CoA ligase (EC 6.2.1.1) from Saccharomyces cerevisiae

25% id,
65% cov

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

25% id,
61% cov

More...

BLU87_RS07535 SAMN05660420_01509 WP_092346326.1: AMP-binding protein
is similar to:
PaperBLAST

HBCL1_METS5 / A4YDT1: 4-hydroxybutyrate--CoA ligase 1; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

24% id,
53% cov

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

25% id,
48% cov

CCL4 / M4IQQ5: isobutanoate/2-methylbutanoate--CoA ligase (EC 6.2.1.1) from Humulus lupulus

27% id,
37% cov

More...

BLU87_RS14560 SAMN05660420_02911 WP_092350123.1: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

24% id,
52% cov

ACSA_MYCS2 / A0R5G1: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Mycolicibacterium smegmatis

23% id,
50% cov

ACS2L_MOUSE / Q99NB1: Acetyl-coenzyme A synthetase 2-like, mitochondrial; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Mus musculus
Q99NB1: acetate-CoA ligase (EC 6.2.1.1) from Mus musculus

23% id,
44% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory