Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodopseudomonas pseudopalustris DSM 123 (GCF_900110435.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 19 relevant proteins in Rhodopseudomonas pseudopalustris DSM 123, or try another query

BMY71_RS01275 SAMN05444123_101256 WP_092681186.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

39% id,
97% cov

BMY71_RS20710 SAMN05444123_11325 WP_011504193.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

35% id,
95% cov

BMY71_RS04060 SAMN05444123_102137 WP_092681922.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

31% id,
99% cov

BMY71_RS06660 SAMN05444123_10386 WP_011503688.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

31% id,
99% cov

BMY71_RS03145 SAMN05444123_101637 WP_011500702.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

31% id,
99% cov

BMY71_RS03155 SAMN05444123_101639 WP_092681614.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

30% id,
99% cov

BMY71_RS09610 SAMN05444123_104145 WP_011502289.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

30% id,
100% cov

BMY71_RS11835 SAMN05444123_105158 WP_011503111.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

31% id,
96% cov

BMY71_RS09585 SAMN05444123_104140 WP_011502284.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

31% id,
97% cov

BMY71_RS02230 SAMN05444123_101449 WP_092681413.1: sugar kinase
is similar to:
PaperBLAST

ABZR86_RS11105: Fructokinase (EC 2.7.1.4) from Dyella japonica

30% id,
98% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

26% id,
89% cov

Q9C524: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

27% id,
84% cov

More...

BMY71_RS05820 SAMN05444123_102487 WP_092682312.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

30% id,
95% cov

BMY71_RS02535 SAMN05444123_101510 WP_092681730.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

30% id,
95% cov

BMY71_RS10980 SAMN05444123_104418 WP_011502623.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

28% id,
98% cov

BMY71_RS02035 SAMN05444123_101413 WP_092681369.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

29% id,
97% cov

BMY71_RS22530 SAMN05444123_1164 WP_092686183.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

28% id,
98% cov

badI BMY71_RS14990 SAMN05444123_10792 WP_092684759.1: 2-ketocyclohexanecarboxyl-CoA hydrolase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

26% id,
98% cov

BMY71_RS03030 SAMN05444123_101612 WP_011500681.1: adenosine kinase
is similar to:
PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

26% id,
93% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

26% id,
93% cov

O04897: fructokinase (EC 2.7.1.4) from Solanum lycopersicum

26% id,
89% cov

More...

BMY71_RS24195 SAMN05444123_1264 WP_092686404.1: 1-phosphofructokinase family hexose kinase
is similar to:
PaperBLAST

Q9SID0: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

26% id,
86% cov

Q42645: fructokinase (EC 2.7.1.4) from Beta vulgaris

26% id,
85% cov

Q9M1B9: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

25% id,
86% cov

More...

BMY71_RS21545 SAMN05444123_11436 WP_092686110.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

24% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 20 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

471658-473433 (frame +1) on NZ_FODT01000001.1 Rhodopseudomonas pseudopalustris strain DSM 123, whole genome shotgun sequence
is similar to:
PaperBLAST

Q9C524: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana
Also see hits to annotated proteins above

27% id,
90% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory