Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfuromonas acetexigens DSM 1397 (GCF_900111775.1)

Found 39 curated entries in PaperBLAST's database that match '2.6.1.57' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Desulfuromonas acetexigens DSM 1397, or try another query

hisC BQ4888_RS15380 BQ4888_02205 WP_092058240.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

33% id,
90% cov

BQ4888_RS00670 BQ4888_00134 WP_092052375.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

29% id,
97% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

29% id,
96% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

29% id,
89% cov

More...

BQ4888_RS05225 BQ4888_03054 WP_092054543.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

29% id,
93% cov

BQ4888_RS14090 BQ4888_01951 WP_092057910.1: aminotransferase
is similar to:
PaperBLAST

Q9C969: aromatic-amino-acid transaminase (EC 2.6.1.57) from Arabidopsis thaliana

29% id,
93% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

26% id,
97% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

25% id,
95% cov

More...

BQ4888_RS08745 BQ4888_03381 WP_092056494.1: cobyric acid synthase
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

28% id,
95% cov

BQ4888_RS10830 BQ4888_01298 WP_092057225.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

29% id,
90% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

28% id,
90% cov

ArAT1 / D7F4K3: aromatic amino acid transaminase (EC 2.6.1.1; EC 2.6.1.57) from Cucumis melo

25% id,
74% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory