Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfuromonas acetexigens DSM 1397 (GCF_900111775.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfuromonas acetexigens DSM 1397, or try another query

BQ4888_RS07915 BQ4888_00839 WP_092056121.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

62% id,
96% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

57% id,
97% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

43% id,
99% cov

guaA BQ4888_RS02305 BQ4888_00458 WP_092053122.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

30% id,
100% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

30% id,
95% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

29% id,
79% cov

carA BQ4888_RS01420 BQ4888_00283 WP_092052693.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

30% id,
96% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

29% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory