Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiohalospira halophila DSM 15071 HL 3 (GCF_900112605.1)

Found 64 curated entries in PaperBLAST's database that match '2.3.1.9' as complete word(s).

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thiohalospira halophila DSM 15071 HL 3, or try another query

fabF BM272_RS02175 SAMN05660831_00439 WP_093427103.1: beta-ketoacyl-ACP synthase II
is similar to:
PaperBLAST

THLA_CLOAB / P45359: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; CaTHL; EC 2.3.1.9 from Clostridium acetobutylicum
P45359: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Clostridium acetobutylicum

29% id,
26% cov

THLA_SYNWW / Q0AVM3: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; EC 2.3.1.9 from Syntrophomonas wolfei

23% id,
22% cov

BM272_RS02155 SAMN05660831_00435 WP_093427099.1: beta-ketoacyl-ACP synthase III
is similar to:
PaperBLAST

THIL_RHIME / P50174: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Rhizobium meliloti
SMc03879: Acetyl-CoA acetyltransferase (EC 2.3.1.9) from Sinorhizobium meliloti

26% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory