Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiohalospira halophila DSM 15071 HL 3 (GCF_900112605.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Thiohalospira halophila DSM 15071 HL 3, or try another query

BM272_RS01980 SAMN05660831_00400 WP_093427070.1: PfkB family carbohydrate kinase
is similar to:
PaperBLAST

G4T023: fructokinase (EC 2.7.1.4) from Methylotuvimicrobium alcaliphilum

46% id,
97% cov

Echvi_2804: Fructokinase (EC 2.7.1.4) from Echinicola vietnamensis

33% id,
93% cov

PfGW456L13_3036: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

29% id,
98% cov

More...

BM272_RS00930 SAMN05660831_00192 WP_093426882.1: PfkB family carbohydrate kinase
is similar to:
PaperBLAST

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

28% id,
92% cov

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

29% id,
86% cov

Ac3H11_3034: Fructokinase (EC 2.7.1.4) from Acidovorax sp.

27% id,
78% cov

More...

nadC BM272_RS04285 SAMN05660831_00861 WP_240308013.1: carboxylating nicotinate-nucleotide diphosphorylase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

29% id,
68% cov

BM272_RS09945 SAMN05660831_02009 WP_093428648.1: SulP family inorganic anion transporter
is similar to:
PaperBLAST

P37829: fructokinase (EC 2.7.1.4) from Solanum tuberosum

28% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory