Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermodesulforhabdus norvegica DSM 9990 (GCF_900114975.1)

Found 30 curated entries in PaperBLAST's database that match '3.1.3.15' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Thermodesulforhabdus norvegica DSM 9990, or try another query

BM091_RS10925 SAMN05660836_02184 WP_093395774.1: inositol monophosphatase family protein
is similar to:
PaperBLAST

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

30% id,
96% cov

Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis

30% id,
88% cov

HISN_STRCO / Q9K4B1: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Streptomyces coelicolor

29% id,
82% cov

More...

cysQ BM091_RS00250 SAMN05660836_00050 WP_093392506.1: 3'(2'),5'-bisphosphate nucleotidase CysQ
is similar to:
PaperBLAST

HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis
P95189: histidinol-phosphatase (EC 3.1.3.15) from Mycobacterium tuberculosis

35% id,
77% cov

HISN_STRCO / Q9K4B1: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Streptomyces coelicolor

30% id,
86% cov

Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis

30% id,
83% cov

More...

hisB BM091_RS12655 SAMN05660836_02521 WP_093396274.1: imidazoleglycerol-phosphate dehydratase HisB
is similar to:
PaperBLAST

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

47% id,
53% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

47% id,
53% cov

HIS7_BACTN / Q8ABA7: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Bacteroides thetaiotaomicron

45% id,
51% cov

More...

BM091_RS03370 SAMN05660836_00677 WP_093393455.1: inositol monophosphatase family protein
is similar to:
PaperBLAST

Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis

27% id,
88% cov

PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens

25% id,
85% cov

BM091_RS03810 SAMN05660836_00768 WP_093393621.1: HAD family hydrolase
is similar to:
PaperBLAST

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

30% id,
44% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

30% id,
44% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory