Curated BLAST for Genomes

 

Curated BLAST

Searching in Paenimyroides ummariense DS-12 (GCF_900115115.1)

Found 15 curated entries in PaperBLAST's database that match '1.1.99.39' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paenimyroides ummariense DS-12, or try another query

BM253_RS15700 SAMN05421741_13524 WP_091526195.1: FAD-linked oxidase C-terminal domain-containing protein
is similar to:
PaperBLAST

D2HDH_STUS1 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC 1.1.99.39; EC 1.1.99.- from Stutzerimonas stutzeri

35% id,
100% cov

D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Xanthomonas citri

37% id,
94% cov

Q9I6H4: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas aeruginosa

33% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory