Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfoscipio geothermicus DSM 3669 (GCF_900115975.1)

Found 44 curated entries in PaperBLAST's database that match '1.4.3.3' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfoscipio geothermicus DSM 3669, or try another query

BM299_RS09480 SAMN05660706_11394 WP_092483372.1: NAD(P)-binding protein
is similar to:
PaperBLAST

DAO_GLUPR / Q7X2D3: D-amino-acid oxidase; DAAO; DAMOX; DAO; GpDAAO-1; GpDAAO-2; EC 1.4.3.3 from Glutamicibacter protophormiae
Q7X2D3: D-amino-acid oxidase (EC 1.4.3.3) from Glutamicibacter protophormiae

22% id,
60% cov

BM299_RS04460 SAMN05660706_10590 WP_092482265.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

OXDA_RHOTO / P80324: D-amino-acid oxidase; DAAO; DAMOX; DAO; EC 1.4.3.3 from Rhodotorula toruloides
P80324: D-amino-acid oxidase (EC 1.4.3.3) from Rhodotorula toruloides

45% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory