Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfoscipio geothermicus DSM 3669 (GCF_900115975.1)

Found 16 curated entries in PaperBLAST's database that match '2.5.1.49' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfoscipio geothermicus DSM 3669, or try another query

BM299_RS10160 SAMN05660706_11517 WP_207545167.1: homocysteine synthase
is similar to:
PaperBLAST

metY / P94890: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) from Leptospira meyeri
P94890: O-acetylhomoserine aminocarboxypropyltransferase (EC 2.5.1.49) from Leptospira meyeri

60% id,
96% cov

CYSD_SCHPO / O13326: Homocysteine synthase; O-acetylhomoserine sulfhydrylase; OAH SHL; OAH sulfhydrylase; EC 2.5.1.49 from Schizosaccharomyces pombe
SPBC428.11 / RF|NP_595189.1: homocysteine synthase Met17; EC 2.5.1.49 from Schizosaccharomyces pombe

56% id,
98% cov

L7N4M1: O-acetylhomoserine aminocarboxypropyltransferase (EC 2.5.1.49) from Mycobacterium tuberculosis

58% id,
92% cov

More...

BM299_RS13065 SAMN05660706_12239 WP_092485054.1: aminotransferase class V-fold PLP-dependent enzyme
is similar to:
PaperBLAST

CYSD_EMENI / P50125: Homocysteine synthase; O-acetylhomoserine sulfhydrylase; OAH SHL; OAH sulfhydrylase; EC 2.5.1.49 from Emericella nidulans
cysD / GI|2605905: O-acetylhomoserine (thiol)-lyase; EC 2.5.1.49 from Emericella nidulans

27% id,
31% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory