Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfoscipio geothermicus DSM 3669 (GCF_900115975.1)

Found 28 curated entries in PaperBLAST's database that match '2.5.1.54' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Desulfoscipio geothermicus DSM 3669, or try another query

aroF BM299_RS00475 SAMN05660706_10196 WP_092481497.1: 3-deoxy-7-phosphoheptulonate synthase
is similar to:
PaperBLAST

Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Aeropyrum pernix

61% id,
99% cov

Q9WYH8: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Thermotoga maritima

53% id,
100% cov

A0A482F152: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from uncultured bacterium

52% id,
100% cov

More...

aroF BM299_RS01575 SAMN05660706_10230 WP_092481712.1: 3-deoxy-7-phosphoheptulonate synthase
is similar to:
PaperBLAST

Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Aeropyrum pernix

61% id,
98% cov

Q9WYH8: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Thermotoga maritima

50% id,
100% cov

A0A482F152: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from uncultured bacterium

52% id,
94% cov

More...

aroF BM299_RS01570 SAMN05660706_10229 WP_281246348.1: 3-deoxy-7-phosphoheptulonate synthase
is similar to:
PaperBLAST

Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Aeropyrum pernix

61% id,
96% cov

A0A482F152: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from uncultured bacterium

49% id,
97% cov

Q9WYH8: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Thermotoga maritima

55% id,
79% cov

More...

aroF BM299_RS01045 SAMN05660706_101210 WP_092481604.1: 3-deoxy-7-phosphoheptulonate synthase
is similar to:
PaperBLAST

Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Aeropyrum pernix

60% id,
96% cov

A0A482F152: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from uncultured bacterium

51% id,
93% cov

Q9WYH8: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Thermotoga maritima

57% id,
78% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory