Searching in Desulfoscipio geothermicus DSM 3669 (GCF_900115975.1)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Desulfoscipio geothermicus DSM 3669, or try another query
| thrB BM299_RS01675 SAMN05660706_10250 WP_092481851.1: homoserine kinase is similar to: | PaperBLAST |
P07128: homoserine kinase (EC 2.7.1.39) from Corynebacterium glutamicum | 39% id, 94% cov |
Q4Q6Y2: homoserine kinase (EC 2.7.1.39) from Leishmania major | 35% id, 92% cov |
thrB / Q58504: homoserine kinase monomer (EC 2.7.1.39) from Methanocaldococcus jannaschii | 32% id, 99% cov |
| ispE BM299_RS07580 SAMN05660706_11055 WP_092482868.1: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase is similar to: | PaperBLAST |
Echvi_2001: homoserine kinase (EC 2.7.1.39) from Echinicola vietnamensis | 30% id, 87% cov |
CA265_RS23470: homoserine kinase (EC 2.7.1.39) from Pedobacter sp. | 28% id, 81% cov |
N515DRAFT_0576: homoserine kinase (EC 2.7.1.39) from Dyella japonica | 27% id, 81% cov |
| BM299_RS06485 SAMN05660706_10889 WP_092482656.1: shikimate kinase is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 29% id, 86% cov |
| cmk BM299_RS01590 SAMN05660706_10233 WP_092481715.1: (d)CMP kinase is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 30% id, 59% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 43417-44283 (frame +1) on NZ_FOYM01000010.1 Desulfoscipio geothermicus DSM 3669, whole genome shotgun sequence is similar to: | PaperBLAST |
Echvi_2001: homoserine kinase (EC 2.7.1.39) from Echinicola vietnamensis | 30% id, 91% cov |
| 78770-79306 (frame -1) on NZ_FOYM01000008.1 Desulfoscipio geothermicus DSM 3669, whole genome shotgun sequence is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 30% id, 91% cov |
Lawrence Berkeley National Laboratory