Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfoscipio geothermicus DSM 3669 (GCF_900115975.1)

Found 30 curated entries in PaperBLAST's database that match '3.1.3.15' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Desulfoscipio geothermicus DSM 3669, or try another query

BM299_RS15995 SAMN05660706_13316 WP_092486701.1: histidinol-phosphatase HisJ family protein
is similar to:
PaperBLAST

hisK / Q5SLG2: histidinol phosphate phosphatase subunit (EC 3.1.3.15) from Thermus thermophilus

39% id,
94% cov

BM299_RS08205 SAMN05660706_11155 WP_092482990.1: inositol monophosphatase family protein
is similar to:
PaperBLAST

HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis
P95189: histidinol-phosphatase (EC 3.1.3.15) from Mycobacterium tuberculosis

35% id,
97% cov

HISN_STRCO / Q9K4B1: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Streptomyces coelicolor

34% id,
98% cov

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

32% id,
96% cov

More...

BM299_RS09450 SAMN05660706_11388 WP_092483361.1: histidinol-phosphatase
is similar to:
PaperBLAST

Q02150: histidinol-phosphatase (EC 3.1.3.15) from Lactococcus lactis

27% id,
98% cov

hisK / Q5SLG2: histidinol phosphate phosphatase subunit (EC 3.1.3.15) from Thermus thermophilus

28% id,
94% cov

HIS9_YEAST / P38635: Histidinol-phosphatase; HolPase; EC 3.1.3.15 from Saccharomyces cerevisiae

34% id,
14% cov

hisB BM299_RS02165 SAMN05660706_102150 WP_092481815.1: imidazoleglycerol-phosphate dehydratase HisB
is similar to:
PaperBLAST

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

48% id,
55% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

48% id,
55% cov

HIS7_SPILD / D2QPE6: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Spirosoma linguale

47% id,
52% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

137356-138006 (frame +1) on NZ_FOYM01000002.1 Desulfoscipio geothermicus DSM 3669, whole genome shotgun sequence
is similar to:
PaperBLAST

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
Also see hits to annotated proteins above

48% id,
57% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli
Also see hits to annotated proteins above

48% id,
57% cov

HIS7_BACTN / Q8ABA7: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Bacteroides thetaiotaomicron
Also see hits to annotated proteins above

45% id,
54% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory