Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfoscipio geothermicus DSM 3669 (GCF_900115975.1)

Found 57 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 47 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfoscipio geothermicus DSM 3669, or try another query

BM299_RS14835 SAMN05660706_12816 WP_165608358.1: ankyrin repeat domain-containing protein
is similar to:
PaperBLAST

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus

34% id,
20% cov

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

27% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory