Searching in Desulfoscipio geothermicus DSM 3669 (GCF_900115975.1)
Found 12 curated entries in PaperBLAST's database that match '4.2.1.90' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Desulfoscipio geothermicus DSM 3669, or try another query
| BM299_RS07255 SAMN05660706_109107 WP_092482800.1: UxaA family hydrolase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 37% id, 91% cov |
| BM299_RS11820 SAMN05660706_1192 WP_092484412.1: UxaA family hydrolase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 34% id, 92% cov |
| BM299_RS11825 SAMN05660706_1193 WP_092484415.1: UxaA family hydrolase is similar to: | PaperBLAST |
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 30% id, 77% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2263-2598 (frame -3) on NZ_FOYM01000019.1 Desulfoscipio geothermicus DSM 3669, whole genome shotgun sequence is similar to: | PaperBLAST |
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 29% id, 83% cov |
Lawrence Berkeley National Laboratory