Curated BLAST
Searching in Desulfoscipio geothermicus DSM 3669 (GCF_900115975.1)
Found 11 curated entries in PaperBLAST's database that match '5.4.3.2' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Desulfoscipio geothermicus DSM 3669, or try another query
ablA BM299_RS06535 SAMN05660706_10898 WP_092482666.1: lysine 2,3-aminomutase is similar to: | PaperBLAST |
KAMA_CLOSU / Q9XBQ8: L-lysine 2,3-aminomutase; LAM; KAM; EC 5.4.3.2 from Clostridium subterminale kamA / Q9XBQ8: lysine 2,3-aminomutase (EC 5.4.3.2) from Clostridium subterminale | 63% id, 96% cov |
KAMA_FUSNN / Q8RHX4: L-lysine 2,3-aminomutase; LAM; KAM; EC 5.4.3.2 from Fusobacterium nucleatum | 61% id, 95% cov |
ABLA_METMA / Q8PYC9: L-lysine 2,3-aminomutase; LAM; EC 5.4.3.2 from Methanosarcina mazei Q8PYC9: lysine 2,3-aminomutase (EC 5.4.3.2) from Methanosarcina mazei | 54% id, 95% cov |
G3F9W8: lysine 2,3-aminomutase (EC 5.4.3.2) from Methanocalculus chunghsingensis | 60% id, 86% cov |
G3F9X2: lysine 2,3-aminomutase (EC 5.4.3.2) from Methanohalophilus portucalensis | 53% id, 94% cov |
ABLA_METMP / Q6LYX4: L-lysine 2,3-aminomutase; LAM; EC 5.4.3.2 from Methanococcus maripaludis Q6LYX4: lysine 2,3-aminomutase (EC 5.4.3.2) from Methanococcus maripaludis | 58% id, 87% cov |
A0A0K0QCW0: lysine 2,3-aminomutase (EC 5.4.3.2) from Bacillus thuringiensis | 56% id, 86% cov |
KAMA_BACSU / O34676: L-lysine 2,3-aminomutase; LAM; KAM; EC 5.4.3.2 from Bacillus subtilis | 53% id, 87% cov |
More... |
eam BM299_RS08870 SAMN05660706_11276 WP_092483144.1: glutamate 2,3-aminomutase is similar to: | PaperBLAST |
KAMA_CLOSU / Q9XBQ8: L-lysine 2,3-aminomutase; LAM; KAM; EC 5.4.3.2 from Clostridium subterminale kamA / Q9XBQ8: lysine 2,3-aminomutase (EC 5.4.3.2) from Clostridium subterminale | 51% id, 86% cov |
ABLA_METMA / Q8PYC9: L-lysine 2,3-aminomutase; LAM; EC 5.4.3.2 from Methanosarcina mazei Q8PYC9: lysine 2,3-aminomutase (EC 5.4.3.2) from Methanosarcina mazei | 49% id, 86% cov |
KAMA_FUSNN / Q8RHX4: L-lysine 2,3-aminomutase; LAM; KAM; EC 5.4.3.2 from Fusobacterium nucleatum | 50% id, 85% cov |
G3F9W8: lysine 2,3-aminomutase (EC 5.4.3.2) from Methanocalculus chunghsingensis | 48% id, 81% cov |
ABLA_METMP / Q6LYX4: L-lysine 2,3-aminomutase; LAM; EC 5.4.3.2 from Methanococcus maripaludis Q6LYX4: lysine 2,3-aminomutase (EC 5.4.3.2) from Methanococcus maripaludis | 47% id, 82% cov |
G3F9X2: lysine 2,3-aminomutase (EC 5.4.3.2) from Methanohalophilus portucalensis | 44% id, 85% cov |
A0A0K0QCW0: lysine 2,3-aminomutase (EC 5.4.3.2) from Bacillus thuringiensis | 46% id, 78% cov |
KAMA_BACSU / O34676: L-lysine 2,3-aminomutase; LAM; KAM; EC 5.4.3.2 from Bacillus subtilis | 46% id, 78% cov |
More... |
BM299_RS00240 SAMN05660706_10146 WP_092481457.1: KamA family radical SAM protein is similar to: | PaperBLAST |
G3F9W8: lysine 2,3-aminomutase (EC 5.4.3.2) from Methanocalculus chunghsingensis | 44% id, 79% cov |
KAMA_CLOSU / Q9XBQ8: L-lysine 2,3-aminomutase; LAM; KAM; EC 5.4.3.2 from Clostridium subterminale kamA / Q9XBQ8: lysine 2,3-aminomutase (EC 5.4.3.2) from Clostridium subterminale | 41% id, 83% cov |
G3F9X2: lysine 2,3-aminomutase (EC 5.4.3.2) from Methanohalophilus portucalensis | 42% id, 80% cov |
ABLA_METMP / Q6LYX4: L-lysine 2,3-aminomutase; LAM; EC 5.4.3.2 from Methanococcus maripaludis Q6LYX4: lysine 2,3-aminomutase (EC 5.4.3.2) from Methanococcus maripaludis | 41% id, 82% cov |
ABLA_METMA / Q8PYC9: L-lysine 2,3-aminomutase; LAM; EC 5.4.3.2 from Methanosarcina mazei Q8PYC9: lysine 2,3-aminomutase (EC 5.4.3.2) from Methanosarcina mazei | 39% id, 85% cov |
KAMA_BACSU / O34676: L-lysine 2,3-aminomutase; LAM; KAM; EC 5.4.3.2 from Bacillus subtilis | 43% id, 75% cov |
A0A0K0QCW0: lysine 2,3-aminomutase (EC 5.4.3.2) from Bacillus thuringiensis | 43% id, 75% cov |
KAMA_FUSNN / Q8RHX4: L-lysine 2,3-aminomutase; LAM; KAM; EC 5.4.3.2 from Fusobacterium nucleatum | 39% id, 81% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory