Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfacinum infernum DSM 9756 (GCF_900129305.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.9' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Desulfacinum infernum DSM 9756, or try another query

BUB04_RS01135 SAMN02745206_00223 WP_218588344.1: 3-oxoacyl-ACP reductase family protein
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 32% id,
100% cov

BUB04_RS05960 SAMN02745206_01189 WP_073037912.1: alcohol dehydrogenase catalytic domain-containing protein
is similar to:		 PaperBLAST

DHSO_ARATH / Q9FJ95: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.56; EC 1.1.1.9 from Arabidopsis thaliana

 34% id,
93% cov

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

 31% id,
95% cov

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

 32% id,
90% cov

More...

BUB04_RS08480 SAMN02745206_01703 WP_073038566.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 32% id,
97% cov

fabG BUB04_RS18395 SAMN02745206_03728 WP_073042225.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 32% id,
97% cov

BUB04_RS05975 SAMN02745206_01192 WP_073037918.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 31% id,
100% cov

BUB04_RS12055 SAMN02745206_02428 WP_073039830.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 30% id,
100% cov

BUB04_RS09810 SAMN02745206_01973 WP_073038838.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 29% id,
100% cov

BUB04_RS15125 SAMN02745206_03063 WP_073040991.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:		 PaperBLAST

G3AIB3: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

 29% id,
91% cov

S6BFC0: D-xylulose reductase (EC 1.1.1.9) from Rhizomucor pusillus

 27% id,
90% cov

G3AIP8: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

 27% id,
90% cov

More...

BUB04_RS15230 SAMN02745206_03085 WP_073041030.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:		 PaperBLAST

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

 28% id,
94% cov

A0A1B4XTS0: L-arabinitol 4-dehydrogenase (EC 1.1.1.12); D-xylulose reductase (EC 1.1.1.9) from Meyerozyma caribbica

 27% id,
98% cov

xdhA / Q5GN51: D-xylulose reductase (EC 1.1.1.9) from Aspergillus niger

 28% id,
91% cov

More...

BUB04_RS07485 SAMN02745206_01500 WP_073038373.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 25% id,
94% cov

BUB04_RS00305 SAMN02745206_00058 WP_073035839.1: zinc-dependent alcohol dehydrogenase family protein
is similar to:		 PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

 29% id,
77% cov

BUB04_RS01190 SAMN02745206_00234 WP_073036171.1: zinc-binding dehydrogenase
is similar to:		 PaperBLAST

DHSO_ARATH / Q9FJ95: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.56; EC 1.1.1.9 from Arabidopsis thaliana

 24% id,
86% cov

sdhA / A2QM95: L-arabinitol dehydrogenase (EC 1.1.1.12; EC 1.1.1.9; EC 1.1.1.14) from Aspergillus niger

 26% id,
77% cov

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

 23% id,
75% cov

More...

BUB04_RS04965 SAMN02745206_00990 WP_245795127.1: FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

S6BFC0: D-xylulose reductase (EC 1.1.1.9) from Rhizomucor pusillus

 35% id,
28% cov

DHSO_RAT / P27867: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Rattus norvegicus

 35% id,
15% cov

G3AIB3: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

 34% id,
16% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3428-4504 (frame -3) on NZ_FQVB01000010.1 Desulfacinum infernum DSM 9756, whole genome shotgun sequence
is similar to:		 PaperBLAST

DHSO_ARATH / Q9FJ95: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.56; EC 1.1.1.9 from Arabidopsis thaliana
Also see hits to annotated proteins above

 33% id,
99% cov

XYL2_ASPOR / Q86ZV0: D-xylulose reductase A; Xylitol dehydrogenase A; EC 1.1.1.9 from Aspergillus oryzae
GI|83774265: xylitol dehydrogenase; EC 1.1.1.9 from Aspergillus oryzae
xdhA / Q86ZV0: NAD+-dependent xylitol dehydrogenase (EC 1.1.1.9) from Aspergillus oryzae
Q86ZV0: D-xylulose reductase (EC 1.1.1.9) from Aspergillus oryzae
Also see hits to annotated proteins above

 30% id,
97% cov

DHSO_BOVIN / Q58D31: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bos taurus
Also see hits to annotated proteins above

 29% id,
97% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory