Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfacinum infernum DSM 9756 (GCF_900129305.1)

Found 27 curated entries in PaperBLAST's database that match '1.2.1.26' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Desulfacinum infernum DSM 9756, or try another query

pruA BUB04_RS13170 SAMN02745206_02656 WP_073040272.1: L-glutamate gamma-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Ac3H11_612: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Acidovorax sp.

38% id,
95% cov

KGSDH_HALVD / D4GP41: Alpha-ketoglutarate semialdehyde dehydrogenase; KGSADH; EC 1.2.1.26 from Haloferax volcanii
xacF / D4GP41: α-ketoglutarate semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Haloferax volcanii

38% id,
93% cov

KGSDH_BACSU / P42236: Alpha-ketoglutaric semialdehyde dehydrogenase; alphaKGSA dehydrogenase; 2,5-dioxovalerate dehydrogenase; EC 1.2.1.26 from Bacillus subtilis

37% id,
94% cov

More...

BUB04_RS05780 SAMN02745206_01153 WP_073037816.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

KGSDH_SACS2 / Q97UA1: 2,5-dioxopentanoate dehydrogenase; DopDH; Aldehyde dehydrogenase T; Alpha-ketoglutaric semialdehyde dehydrogenase AldhT; EC 1.2.1.26 from Saccharolobus solfataricus
dopDH / Q97UA1: 2,5-dioxopentanoate dehydrogenase subunit (EC 1.2.1.26) from Saccharolobus solfataricus
Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus

36% id,
100% cov

KGSDH_HALVD / D4GP41: Alpha-ketoglutarate semialdehyde dehydrogenase; KGSADH; EC 1.2.1.26 from Haloferax volcanii
xacF / D4GP41: α-ketoglutarate semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Haloferax volcanii

36% id,
97% cov

xylA / A0A0H3C801: 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Caulobacter vibrioides

35% id,
97% cov

More...

BUB04_RS04110 SAMN02745206_00818 WP_178371896.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

xylA / A0A0H3C801: 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Caulobacter vibrioides

36% id,
98% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

37% id,
96% cov

KGSDH_HALVD / D4GP41: Alpha-ketoglutarate semialdehyde dehydrogenase; KGSADH; EC 1.2.1.26 from Haloferax volcanii
xacF / D4GP41: α-ketoglutarate semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Haloferax volcanii

36% id,
97% cov

More...

BUB04_RS11765 SAMN02745206_02370 WP_073039723.1: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

KGSDH_BACSU / P42236: Alpha-ketoglutaric semialdehyde dehydrogenase; alphaKGSA dehydrogenase; 2,5-dioxovalerate dehydrogenase; EC 1.2.1.26 from Bacillus subtilis

27% id,
99% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

27% id,
99% cov

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

28% id,
92% cov

More...

BUB04_RS17530 SAMN02745206_03554 WP_073041910.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

xylA / A0A0H3C801: 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Caulobacter vibrioides

25% id,
80% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory