Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfacinum infernum DSM 9756 (GCF_900129305.1)

Found 52 curated entries in PaperBLAST's database that match '1.5.5.2' as complete word(s).

These curated entries have 43 distinct sequences.

Running ublast with E ≤ 0.01

Found 30 relevant proteins in Desulfacinum infernum DSM 9756, or try another query

BUB04_RS16575 SAMN02745206_03358 WP_073041560.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q5JFG2: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

32% id,
99% cov

Q76M73: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

31% id,
99% cov

Q5JFG7: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

28% id,
98% cov

More...

pruA BUB04_RS13170 SAMN02745206_02656 WP_073040272.1: L-glutamate gamma-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

33% id,
91% cov

PRODH_THET2 / Q72IB8: Proline dehydrogenase; PRODH; Proline oxidase; TtPRODH; EC 1.5.5.2 from Thermus thermophilus
Q72IB8: proline dehydrogenase (EC 1.5.5.2) from Thermus thermophilus

30% id,
94% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

32% id,
87% cov

More...

glpA BUB04_RS03670 SAMN02745206_00731 WP_073037048.1: anaerobic glycerol-3-phosphate dehydrogenase subunit GlpA
is similar to:
PaperBLAST

Q8U1G2: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

25% id,
96% cov

Q5JFG7: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

25% id,
95% cov

O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

22% id,
92% cov

BUB04_RS16585 SAMN02745206_03360 WP_073041564.1: 2Fe-2S iron-sulfur cluster-binding protein
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

27% id,
77% cov

O59088: proline dehydrogenase (subunit 2/2) (EC 1.5.5.2) from Pyrococcus horikoshii

31% id,
31% cov

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

39% id,
19% cov

BUB04_RS01360 SAMN02745206_00268 WP_073036231.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

25% id,
78% cov

O59088: proline dehydrogenase (subunit 2/2) (EC 1.5.5.2) from Pyrococcus horikoshii

26% id,
33% cov

lpdA BUB04_RS07790 SAMN02745206_01561 WP_073038433.1: dihydrolipoyl dehydrogenase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

26% id,
71% cov

BUB04_RS11400 SAMN02745206_02294 WP_073039578.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

25% id,
74% cov

BUB04_RS17945 SAMN02745206_03642 WP_073042064.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

26% id,
66% cov

BUB04_RS04110 SAMN02745206_00818 WP_178371896.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

30% id,
46% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

32% id,
42% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

31% id,
44% cov

More...

BUB04_RS05780 SAMN02745206_01153 WP_073037816.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

29% id,
43% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

28% id,
43% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

28% id,
42% cov

More...

BUB04_RS06655 SAMN02745206_01329 WP_073038168.1: NAD(P)-binding protein
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

21% id,
57% cov

BUB04_RS11765 SAMN02745206_02370 WP_073039723.1: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

27% id,
37% cov

SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis

23% id,
41% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

23% id,
38% cov

More...

BUB04_RS01305 SAMN02745206_00257 WP_073036213.1: mercuric reductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

27% id,
35% cov

lpdA BUB04_RS03960 SAMN02745206_00788 WP_073037169.1: dihydrolipoyl dehydrogenase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

24% id,
38% cov

BUB04_RS06650 SAMN02745206_01328 WP_073038166.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

28% id,
33% cov

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

34% id,
12% cov

trxB BUB04_RS04755 SAMN02745206_00948 WP_073037472.1: thioredoxin-disulfide reductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

27% id,
32% cov

O59088: proline dehydrogenase (subunit 2/2) (EC 1.5.5.2) from Pyrococcus horikoshii

26% id,
22% cov

BUB04_RS20045 SAMN02745206_00724 WP_281246576.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

30% id,
26% cov

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

32% id,
13% cov

BUB04_RS09175 SAMN02745206_01845 WP_084076342.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

31% id,
24% cov

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

28% id,
26% cov

BUB04_RS16000 SAMN02745206_03245 WP_073041331.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

27% id,
24% cov

BUB04_RS20155 SAMN02745206_03114 WP_073041088.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

29% id,
23% cov

BUB04_RS04965 SAMN02745206_00990 WP_245795127.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

36% id,
17% cov

BUB04_RS02590 SAMN02745206_00516 WP_073036664.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

32% id,
19% cov

BUB04_RS14150 SAMN02745206_02858 WP_281246604.1: CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

26% id,
23% cov

BUB04_RS05145 SAMN02745206_01025 WP_073037600.1: FAD-dependent protein
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

25% id,
22% cov

BUB04_RS05165 SAMN02745206_01028 WP_178371909.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

30% id,
18% cov

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

33% id,
13% cov

BUB04_RS14665 SAMN02745206_02965 WP_073040821.1: CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

31% id,
17% cov

BUB04_RS20190 WP_178372043.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

31% id,
16% cov

BUB04_RS20175 WP_178372033.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

31% id,
16% cov

BUB04_RS18380 SAMN02745206_03724 WP_073042219.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

O59445: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

45% id,
10% cov

Q8U022: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

45% id,
10% cov

O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

38% id,
12% cov

More...

BUB04_RS14670 SAMN02745206_02966 WP_073040823.1: CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

38% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 22 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory