Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfacinum infernum DSM 9756 (GCF_900129305.1)

Found 15 curated entries in PaperBLAST's database that match '2.7.2.15' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfacinum infernum DSM 9756, or try another query

BUB04_RS16485 SAMN02745206_03341 WP_073041528.1: acetate kinase
is similar to:
PaperBLAST

ackA / E3PRH0: acetate kinase (EC 2.7.2.15) from Acetoanaerobium sticklandii

49% id,
100% cov

ackA / P71104: acetate kinase monomer (EC 2.7.2.15) from Clostridium acetobutylicum

48% id,
98% cov

AckA / b2296: acetate kinase (EC 2.7.2.15; EC 2.7.2.1; EC 2.7.2.7; EC 2.7.2.14) from Escherichia coli
ackA / P0A6A3: acetate kinase (EC 2.7.2.15; EC 2.7.2.7) from Escherichia coli

47% id,
99% cov

More...

BUB04_RS17570 SAMN02745206_03562 WP_073041924.1: cupin domain-containing protein
is similar to:
PaperBLAST

eutQ / Q9ZFV5: acetate kinase (EC 2.7.2.15) from Salmonella typhimurium

31% id,
96% cov

BUB04_RS01140 SAMN02745206_00224 WP_073036162.1: acetate--CoA ligase family protein
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

34% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory