Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfacinum infernum DSM 9756 (GCF_900129305.1)

Found 37 curated entries in PaperBLAST's database that match '3.5.1.25' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfacinum infernum DSM 9756, or try another query

iadA BUB04_RS12650 SAMN02745206_02549 WP_073040066.1: beta-aspartyl-peptidase
is similar to:
PaperBLAST

PS417_22985: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas simiae

27% id,
90% cov

AO356_17550: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens

24% id,
95% cov

AO353_04450: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens

28% id,
52% cov

More...

BUB04_RS02455 SAMN02745206_00488 WP_073036627.1: amidohydrolase family protein
is similar to:
PaperBLAST

agaA / Q8XAC3: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli

39% id,
15% cov

hutI BUB04_RS12235 SAMN02745206_02464 WP_073039903.1: imidazolonepropionase
is similar to:
PaperBLAST

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

44% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

19854-21617 (frame -1) on NZ_FQVB01000024.1 Desulfacinum infernum DSM 9756, whole genome shotgun sequence
is similar to:
PaperBLAST

NAGA_MOUSE / Q8JZV7: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; Amidohydrolase domain-containing protein 2; EC 3.5.1.25 from Mus musculus
Also see hits to annotated proteins above

45% id,
13% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory