Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfacinum infernum DSM 9756 (GCF_900129305.1)

Found 65 curated entries in PaperBLAST's database that match '3.5.3.1' as complete word(s).

These curated entries have 50 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Desulfacinum infernum DSM 9756, or try another query

speB BUB04_RS18635 SAMN02745206_00293 WP_084075870.1: agmatinase
is similar to:
PaperBLAST

ARGI1_ORYSI / B8AU84: Arginase 1, mitochondrial; Arginine amidohydrolase 1; EC 3.5.3.1 from Oryza sativa

44% id,
99% cov

ARG1 / Q5UNS2: arginase (EC 3.5.3.1) from Solanum lycopersicum
Q5UNS2: arginase (EC 3.5.3.1) from Solanum lycopersicum

45% id,
94% cov

ARG2 / Q5UNS1: arginase (EC 3.5.3.1) from Solanum lycopersicum
Q5UNS1: arginase (EC 3.5.3.1) from Solanum lycopersicum

47% id,
89% cov

More...

BUB04_RS08165 SAMN02745206_01637 WP_073038499.1: agmatinase family protein
is similar to:
PaperBLAST

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

36% id,
87% cov

ARG1 / Q5UNS2: arginase (EC 3.5.3.1) from Solanum lycopersicum
Q5UNS2: arginase (EC 3.5.3.1) from Solanum lycopersicum

34% id,
83% cov

N515DRAFT_0348: Arginase (EC 3.5.3.1) from Dyella japonica

29% id,
97% cov

More...

BUB04_RS08150 SAMN02745206_01634 WP_073038496.1: arginase family protein
is similar to:
PaperBLAST

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

31% id,
88% cov

N515DRAFT_0348: Arginase (EC 3.5.3.1) from Dyella japonica

27% id,
96% cov

arcA / P14012: arginase subunit (EC 3.5.3.1) from Agrobacterium fabrum

28% id,
88% cov

More...

speB BUB04_RS04365 SAMN02745206_00869 WP_073037405.1: agmatinase
is similar to:
PaperBLAST

A4IJM8: arginase (EC 3.5.3.1) from Geobacillus thermodenitrificans

28% id,
90% cov

ARGI_BACSU / P39138: Arginase; EC 3.5.3.1 from Bacillus subtilis
argI / P39138: arginase (EC 3.5.3.1) from Bacillus subtilis
P39138: arginase (EC 3.5.3.1) from Bacillus subtilis

26% id,
94% cov

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

30% id,
82% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory