Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfacinum infernum DSM 9756 (GCF_900129305.1)

Found 7 curated entries in PaperBLAST's database that match '4.2.1.116' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 22 relevant proteins in Desulfacinum infernum DSM 9756, or try another query

BUB04_RS03725 SAMN02745206_00742 WP_073037062.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

51% id,
99% cov

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

50% id,
100% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

46% id,
99% cov

More...

BUB04_RS07705 SAMN02745206_01544 WP_073038418.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

45% id,
100% cov

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

41% id,
100% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

38% id,
100% cov

More...

BUB04_RS15240 SAMN02745206_03088 WP_073041034.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

39% id,
100% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

37% id,
99% cov

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

36% id,
100% cov

More...

BUB04_RS06580 SAMN02745206_01314 WP_073038140.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

37% id,
100% cov

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

26% id,
13% cov

BUB04_RS15115 SAMN02745206_03061 WP_073040986.1: 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

35% id,
100% cov

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

33% id,
97% cov

BUB04_RS09760 SAMN02745206_01963 WP_073038817.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

35% id,
97% cov

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

32% id,
98% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

32% id,
94% cov

BUB04_RS01125 SAMN02745206_00221 WP_143156309.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

34% id,
99% cov

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

36% id,
93% cov

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

34% id,
98% cov

More...

BUB04_RS01090 SAMN02745206_00214 WP_245795096.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

42% id,
81% cov

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

41% id,
80% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

38% id,
82% cov

More...

BUB04_RS15800 SAMN02745206_03204 WP_143156522.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

34% id,
97% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

32% id,
100% cov

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

31% id,
99% cov

BUB04_RS16430 SAMN02745206_03331 WP_073041507.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

28% id,
93% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

27% id,
76% cov

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

32% id,
10% cov

BUB04_RS13370 SAMN02745206_02700 WP_073040343.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

32% id,
71% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

27% id,
70% cov

fabG BUB04_RS18395 SAMN02745206_03728 WP_073042225.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

40% id,
25% cov

BUB04_RS09815 SAMN02745206_01974 WP_073038840.1: MaoC/PaaZ C-terminal domain-containing protein
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

32% id,
29% cov

BUB04_RS09810 SAMN02745206_01973 WP_073038838.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

44% id,
20% cov

BUB04_RS05975 SAMN02745206_01192 WP_073037918.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

35% id,
25% cov

acs BUB04_RS16450 SAMN02745206_03334 WP_073041514.1: acetate--CoA ligase
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

35% id,
24% cov

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

37% id,
11% cov

BUB04_RS08480 SAMN02745206_01703 WP_073038566.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

30% id,
25% cov

BUB04_RS12055 SAMN02745206_02428 WP_073039830.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

38% id,
20% cov

BUB04_RS12655 SAMN02745206_02550 WP_073040069.1: propionyl-CoA synthetase
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

28% id,
24% cov

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

30% id,
12% cov

BUB04_RS07990 SAMN02745206_01602 WP_073038467.1: acyl-CoA synthetase
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

32% id,
9% cov

BUB04_RS01550 SAMN02745206_00306 WP_073036290.1: acetoacetate--CoA ligase
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

26% id,
9% cov

BUB04_RS12080 SAMN02745206_02433 WP_073039840.1: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

29% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 22 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

85974-86798 (frame +3) on NZ_FQVB01000017.1 Desulfacinum infernum DSM 9756, whole genome shotgun sequence
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans
Also see hits to annotated proteins above

40% id,
23% cov

49701-50507 (frame -2) on NZ_FQVB01000023.1 Desulfacinum infernum DSM 9756, whole genome shotgun sequence
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans
Also see hits to annotated proteins above

37% id,
20% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory