Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfacinum infernum DSM 9756 (GCF_900129305.1)

Found 23 curated entries in PaperBLAST's database that match '4.3.1.3' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfacinum infernum DSM 9756, or try another query

hutH BUB04_RS15610 SAMN02745206_03164 WP_073041183.1: histidine ammonia-lyase
is similar to:
PaperBLAST

HUTH_PSEPU / P21310: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Pseudomonas putida
hutH / P21310: histidase subunit (EC 4.3.1.3) from Pseudomonas putida

46% id,
100% cov

BPHYT_RS07555: Histidine ammonia-lyase (EC 4.3.1.3) from Burkholderia phytofirmans

47% id,
97% cov

Ga0059261_3963: Histidine ammonia-lyase (EC 4.3.1.3) from Sphingomonas koreensis

47% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory