Searching in Bacteroides clarus YIT 12056 (GCF_900129655.1)
Found 4 curated entries in PaperBLAST's database that match '1.1.1.43' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Bacteroides clarus YIT 12056, or try another query
| BUB52_RS10335 SAMN05444376_2115 WP_009122071.1: 2-hydroxyacid dehydrogenase family protein is similar to: | PaperBLAST |
BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans | 40% id, 83% cov |
kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens | 39% id, 84% cov |
AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens | 40% id, 79% cov |
| BUB52_RS07370 SAMN05444376_1510 WP_009121223.1: D-2-hydroxyacid dehydrogenase is similar to: | PaperBLAST |
AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens | 35% id, 85% cov |
PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae | 32% id, 89% cov |
| BUB52_RS05615 SAMN05444376_1148 WP_009121577.1: 2-hydroxyacid dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans | 28% id, 91% cov |
| BUB52_RS07490 SAMN05444376_1534 WP_009121197.1: NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans | 28% id, 84% cov |
| pdxB BUB52_RS14265 SAMN05444376_2918 WP_009120258.1: 4-phosphoerythronate dehydrogenase PdxB is similar to: | PaperBLAST |
kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens | 28% id, 55% cov |
BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans | 29% id, 52% cov |
AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens | 29% id, 51% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 203482-204468 (frame +1) on NZ_FQWK01000005.1 Bacteroides clarus YIT 12056, whole genome shotgun sequence is similar to: | PaperBLAST |
kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens | 36% id, 98% cov |
Lawrence Berkeley National Laboratory