Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides clarus YIT 12056 (GCF_900129655.1)

Found 16 curated entries in PaperBLAST's database that match '2.7.1.147' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Bacteroides clarus YIT 12056, or try another query

BUB52_RS14525 SAMN05444376_2971 WP_009122352.1: ROK family protein
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

38% id,
99% cov

BUB52_RS04275 SAMN05444376_0873 WP_087942772.1: ROK family protein
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

35% id,
99% cov

BUB52_RS10045 SAMN05444376_2057 WP_009122012.1: ROK family protein
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

31% id,
98% cov

BUB52_RS12330 SAMN05444376_2522 WP_009120653.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

29% id,
99% cov

BUB52_RS01145 SAMN05444376_0234 WP_009123062.1: ROK family protein
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

28% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory