Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides clarus YIT 12056 (GCF_900129655.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Bacteroides clarus YIT 12056, or try another query

BUB52_RS14525 SAMN05444376_2971 WP_009122352.1: ROK family protein
is similar to:
PaperBLAST

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

38% id,
98% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

36% id,
98% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

35% id,
99% cov

More...

BUB52_RS04275 SAMN05444376_0873 WP_087942772.1: ROK family protein
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

35% id,
98% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

35% id,
98% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

35% id,
98% cov

More...

galK BUB52_RS12590 SAMN05444376_2575 WP_009120601.1: galactokinase
is similar to:
PaperBLAST

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

36% id,
93% cov

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

33% id,
96% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

33% id,
91% cov

BUB52_RS01145 SAMN05444376_0234 WP_009123062.1: ROK family protein
is similar to:
PaperBLAST

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

32% id,
97% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

31% id,
96% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

30% id,
98% cov

More...

BUB52_RS10045 SAMN05444376_2057 WP_009122012.1: ROK family protein
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

31% id,
96% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

28% id,
97% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

28% id,
97% cov

More...

BUB52_RS12330 SAMN05444376_2522 WP_009120653.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

29% id,
98% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

29% id,
98% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

29% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory