Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfurivirga caldicuralii DSM 17737 (GCF_900141795.1)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Sulfurivirga caldicuralii DSM 17737, or try another query

BUQ81_RS07000 SAMN05443662_1409 WP_074201667.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

AAPAT_NITEU / Q82WA8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Nitrosomonas europaea

 58% id,
99% cov

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

 57% id,
97% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 51% id,
98% cov

More...

BUQ81_RS02440 SAMN05443662_0491 WP_074200794.1: branched-chain amino acid transaminase
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 48% id,
97% cov

alaC BUQ81_RS04875 SAMN05443662_0979 WP_074201258.1: alanine transaminase
is similar to:		 PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 46% id,
95% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 36% id,
99% cov

AAT_SYNY3 / Q55128: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Synechocystis sp.

 34% id,
97% cov

More...

hisC BUQ81_RS05080 SAMN05443662_1021 WP_074201292.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 41% id,
100% cov

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum

 26% id,
89% cov

Q8YY14: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 27% id,
81% cov

More...

hisC BUQ81_RS05795 SAMN05443662_1166 WP_074201462.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 32% id,
99% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 26% id,
83% cov

BUQ81_RS03220 SAMN05443662_0649 WP_074200966.1: D-amino acid aminotransferase
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 27% id,
94% cov

BUQ81_RS00265 SAMN05443662_0051 WP_074200404.1: DegT/DnrJ/EryC1/StrS family aminotransferase
is similar to:		 PaperBLAST

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 29% id,
41% cov

Q8YY14: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 31% id,
29% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 31% id,
28% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory